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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs881816 chr4:3365366 A/G 7.9E-6 480 11.78 15.13 16.87 KM Plot
THCA rs881817 chr4:3365381 A/G 1.02E-5 479 12.08 15.83 16.8 KM Plot
THCA rs882985 chr10:72703484 G/A 1.76E-5 477 15.13 18.8 15.92 KM Plot
THCA rs885982 chr22:19338201 A/G 9.42E-10 490 17.3 15.42 15.87 KM Plot
THCA rs898671 chr2:240926 T/C 5.67E-12 485 15.97 15.23 20.63 KM Plot
THCA rs902777 chr6:119152889 A/G 0.000271 483 16.33 14.23 21.77 KM Plot
THCA rs906319 chr6:79520689 A/G 6.77E-6 490 18.8 17.65 15.65 KM Plot
THCA rs908802 chr1:224381250 C/T 7.54E-5 490 16.67 14.72 13.8 KM Plot
THCA rs908803 chr1:224381107 C/T 0.000119 490 16.65 14.8 13.8 KM Plot
THCA rs908804 chr1:224380234 A/G 0.000119 490 16.65 14.8 13.8 KM Plot
THCA rs909816 chr1:22456970 C/T 2.46E-7 473 15.63 18.55 6.72 KM Plot
THCA rs910568 chr4:3307373 A/G 0.000176 488 12.5 15.3 16.95 KM Plot
THCA rs916171 chr4:3216815 C/G 7.68E-5 490 14.3 14.67 17.13 KM Plot
THCA rs922903 chr2:48342373 C/T 8.16E-6 487 14.73 17.35 14.47 KM Plot
THCA rs9284239 chr13:108892421 C/G 1.4E-9 490 15.33 17.38 13.77 KM Plot